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Biographies and Literature
Jewish Literature from the Eighth to the Eighteenth Centuries
Josephus
Philo Judaeus of Alexandria
Post-Biblical Hebrew Literature
Rashi

History
Against Apion
Antiquities of the Jews
Biblical Antiquities of Philo
Education Among the Jews
Makers and Teachers of Judaism
Wars of the Jews

Karaites (external links)
A History of Two of Ben-Asher’s Codicies
Adderet Eliyahu
History of the Karaites, pgs 22 – 26
History of the Karaites pgs 29-57
Isaac ben-Solomon on the Karaite Creed

Midrash
Flowers of the Midrash
Legends of Old Testament Characters
Midrash and Mishnah
Tales and Maxims from the Midrash

Philosophy and Theology
Discourse to the Greeks Concerning Hades
Guide to the Perplexed (Part One)
Guide to the Perplexed (Part Two)
Guide to the Perplexed (Part Three)
Judaism
The Jewish Messiah
Karaite Siddur (external link)

Talmud and Mishnah
Introduction to the Talmud
The Criminal Code of the Jews
Pirkei Avot
The School System of the Talmud
The Wisdom of Israel
The Wisdom of the Talmud

Targum
Targum (Genesis-Exodus)
Targum (Leviticus-Deuteronomy)
Targum Jonathan to the Prophets